STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101343991Proto-oncogene Mas; Belongs to the G-protein coupled receptor 1 family. (325 aa)    
Predicted Functional Partners:
LOC101351576
Angiotensinogen; Belongs to the serpin family.
    
 0.933
LOC101357876
Ubiquitin-like protein 7 isoform X1.
    
 0.676
LOC101350925
Zinc finger protein 428.
      
 0.670
LOC101347494
pro-FMRFamide-related neuropeptide FF.
     
 0.652
LOC101348609
Choline transporter-like protein 3 isoform X4; Belongs to the CTL (choline transporter-like) family.
      
 0.622
LOC101352600
Anamorsin; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex NUBP1-NUBP2. Electrons are transferred to CIAPIN1 from NADPH via the FAD- and FMN-containing protein NDOR1. NDOR1-CIAPIN1 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by providing electron [...]
      
 0.574
LOC101360222
RAB6A-GEF complex partner protein 1 isoform X1.
      
 0.574
LOC101344578
Taste receptor type 2.
  
 
  0.451
LOC101358552
E3 ubiquitin-protein ligase CCNB1IP1.
      
 0.450
LOC101357669
Taste receptor type 2.
  
 
  0.430
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.