STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101344079Heme-binding protein 2. (205 aa)    
Predicted Functional Partners:
LOC101346361
Bcl-2-like protein 1 isoform X1.
   
 
 0.984
LOC101347398
Peflin.
    
 
 0.579
LOC101358068
Programmed cell death protein 6 isoform X1.
    
 
 0.579
LOC101341801
Bcl-2-like protein 2.
   
 
 0.576
LOC101356136
LOW QUALITY PROTEIN: cat eye syndrome critical region protein 2.
      
 0.574
LOC101345739
Microtubule-associated protein 1S.
   
  
 0.522
LOC101352789
Protein UXT isoform X1.
      
 0.519
LOC101356513
Leucine-rich PPR motif-containing protein, mitochondrial isoform X1.
    
 
 0.498
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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