STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101356596Protrudin. (403 aa)    
Predicted Functional Partners:
LOC101348140
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.719
LOC101345234
Vesicle-associated membrane protein-associated protein A isoform X1.
    
 
 0.675
LOC101360367
Receptor expression-enhancing protein.
    
 
 0.612
LOC101354178
stAR-related lipid transfer protein 3 isoform X1.
   
  
 0.581
LOC101348596
Tectonin beta-propeller repeat-containing protein 2.
   
  
 0.573
LOC101349168
Vesicle-associated membrane protein-associated protein B/C.
    
 
 0.572
LOC101358273
FYVE and coiled-coil domain-containing protein 1.
      
 0.570
LOC101359267
LOW QUALITY PROTEIN: WASH complex subunit 5.
      
 0.551
LOC101344073
Motile sperm domain-containing protein 3 isoform X1.
    
 
 0.498
LOC101355113
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 
 0.479
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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