STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361056Zinc finger and BTB domain-containing protein 46. (589 aa)    
Predicted Functional Partners:
LOC101340865
Chemokine XC receptor 1.
      
 0.574
LOC101360460
E3 ubiquitin-protein ligase HUWE1.
    
   0.443
LOC101353010
Basic leucine zipper transcriptional factor ATF-like 3 isoform X2.
    
 0.409
LOC101357159
LOW QUALITY PROTEIN: 3 beta-hydroxysteroid dehydrogenase type 7.
   
  
 0.408
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.