STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101346279Low-density lipoprotein receptor-related protein 12 isoform X1. (860 aa)    
Predicted Functional Partners:
LOC101356968
Intersectin-2 isoform X4.
    
 0.650
LOC101341353
Casein kinase I isoform X1; Belongs to the protein kinase superfamily.
    
 0.597
LOC101346083
Hypoxia up-regulated protein 1.
    
 
 0.528
LOC101361669
Reelin.
    
 0.514
LOC101349957
Basement membrane-specific heparan sulfate proteoglycan core protein.
    
0.469
LOC101343627
Agrin.
    
 0.469
LOC101355643
Intersectin-1 isoform X1.
    
 0.459
LOC101347545
Pikachurin.
    
 0.456
LOC101347041
Amyloid-like protein 1 isoform X1.
    
 0.440
LOC101361873
CD2-associated protein isoform X1.
  
  
 0.439
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.