STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358901SUN domain-containing protein 5. (373 aa)    
Predicted Functional Partners:
LOC101350762
Nesprin-1 isoform X1.
    
 0.607
LOC101340771
Protein Hook homolog 1 isoform X1.
    
 
 0.587
LOC101350775
Nesprin-2.
    
 0.559
LOC101349062
Polyamine-modulated factor 1-binding protein 1.
    
 
 0.512
LOC101343572
Spermatogenesis-associated protein 6 isoform X1.
      
 0.506
LOC101341953
Parkin coregulated gene protein.
      
 0.495
LOC101346486
Nesprin-3.
    
 
 0.481
LOC101344174
Nesprin-4 isoform X1.
    
 
 0.476
LOC101346845
Lymphoid-restricted membrane protein.
    
 
 0.459
LOC101361657
Testis-specific gene 10 protein isoform X1.
   
  
 0.454
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.