STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101348738Potassium voltage-gated channel subfamily H member 5 isoform X1. (988 aa)    
Predicted Functional Partners:
LOC101360581
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
   
 
 0.576
LOC101359224
Calcium/calmodulin-dependent protein kinase type II subunit alpha; Belongs to the protein kinase superfamily.
    
 
 0.571
LOC101353435
Calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1; Belongs to the protein kinase superfamily.
    
 
 0.571
LOC101353082
Calcium/calmodulin-dependent protein kinase type II subunit beta.
    
 
 0.571
LOC101349891
LOW QUALITY PROTEIN: voltage-gated potassium channel subunit beta-1.
    
 0.568
LOC101350594
Voltage-gated potassium channel subunit beta-2 isoform X4.
    
 0.568
LOC101349623
Voltage-gated potassium channel subunit beta-3 isoform X1.
    
 0.567
LOC101349114
Aflatoxin B1 aldehyde reductase member 4 isoform X1.
    
 0.498
LOC111820720
LOW QUALITY PROTEIN: aflatoxin B1 aldehyde reductase member 2-like.
    
 0.498
LOC101358487
Calmodulin; Belongs to the calmodulin family.
   
 
 0.485
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.