STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101357100Dendritic cell-specific transmembrane protein. (470 aa)    
Predicted Functional Partners:
LOC101347134
LOW QUALITY PROTEIN: osteoclast stimulatory transmembrane protein.
      
 0.599
LOC101359059
Nuclear factor of activated T-cells, cytoplasmic 1 isoform X1.
      
 0.583
LOC101352607
Cyclic AMP-responsive element-binding protein 3.
    
 0.578
LOC101342165
Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.521
LOC101357438
Macrophage colony-stimulating factor 1 isoform X1.
      
 0.476
LOC101355964
Cyclic AMP-responsive element-binding protein 3-like protein 3.
    
 0.441
LOC101346745
Tartrate-resistant acid phosphatase type 5.
      
 0.435
LOC101352368
Leukocyte surface antigen CD47 isoform X1.
      
 0.435
LOC101351176
Hexosyltransferase.
      
 0.431
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.