STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101360387CLOCK-interacting pacemaker. (399 aa)    
Predicted Functional Partners:
LOC101356904
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
    
 
 0.645
LOC101345073
Neuronal PAS domain-containing protein 2.
    
 
 0.617
LOC101347694
Circadian locomoter output cycles protein kaput.
    
 
 0.617
LOC101351477
Integrin beta-1-binding protein 1.
      
 0.551
LOC101353204
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
    
 
 0.467
LOC101349617
Hepatic triacylglycerol lipase.
      
 0.433
LOC101347166
Nuclear receptor subfamily 1 group D member 2 isoform X1.
      
 0.429
LOC101348173
LOW QUALITY PROTEIN: endoglin.
  
     0.412
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (22%) [HD]