STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361765Ectoderm-neural cortex protein 1. (589 aa)    
Predicted Functional Partners:
LOC101359624
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.720
LOC101361426
Beta-hexosaminidase.
      
 0.574
LOC101360163
Cullin-1; Belongs to the cullin family.
    
 0.545
LOC101355592
Kelch repeat and BTB domain-containing protein 8 isoform X1.
  
 
0.508
LOC101359353
Kelch-like protein 25.
  
 
  
0.505
LOC101349572
Protein PTHB1 isoform X1.
    
 0.489
LOC101343428
N-acylneuraminate-9-phosphatase isoform X1.
   
 
 0.459
LOC101349359
E3 ubiquitin-protein ligase RBX1 isoform X1.
    
 0.458
LOC105755956
NEDD8.
    
 0.452
LOC101343477
Zinc finger protein PLAGL2.
    
 0.450
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.