STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101347912UBX domain-containing protein 4 isoform X1. (508 aa)    
Predicted Functional Partners:
LOC101356451
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.996
LOC101360497
UBX domain-containing protein 6.
    
 0.996
LOC101352501
NSFL1 cofactor p47 isoform X1.
    
 0.939
LOC101358082
UBX domain-containing protein 8 isoform X1.
   
 
 0.939
LOC101347340
UBX domain-containing protein 2A.
    
 0.935
LOC101342353
UBX domain-containing protein 1 isoform X1.
     
0.935
LOC111821822
Small VCP/p97-interacting protein.
     
 0.906
LOC101361083
Tether containing UBX domain for GLUT4.
    
 
 0.763
LOC101356716
UBX domain-containing protein 7.
   
  
 0.721
LOC101351365
E3 ubiquitin-protein ligase TRIP12 isoform X1.
      
 0.714
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.