STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101348254Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (957 aa)    
Predicted Functional Partners:
LOC101355466
Kinesin light chain 2.
   
 0.984
LOC101357978
Kinesin light chain 4.
   
 0.983
LOC101353832
Kinesin light chain 3 isoform X1.
   
 0.975
LOC101357555
Kinesin light chain 1 isoform X1.
   
 0.975
LOC101359636
Kinesin heavy chain isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
0.939
LOC101345488
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
0.934
LOC101351083
Neurofilament medium polypeptide; Belongs to the intermediate filament family.
   
 0.913
LOC101351347
Neurofilament light polypeptide; Belongs to the intermediate filament family.
   
 0.913
LOC101351185
LOW QUALITY PROTEIN: neurofilament heavy polypeptide; Belongs to the intermediate filament family.
   
 0.913
LOC101349186
Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.
   
  0.908
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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