STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101352358Serine protease HTRA1. (416 aa)    
Predicted Functional Partners:
LOC101347488
Non-specific lipid-transfer protein isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.915
LOC101355113
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.685
LOC101346617
Baculoviral IAP repeat-containing protein 6 isoform X1.
    
 0.681
LOC101343713
Bifunctional epoxide hydrolase 2.
  
 
 0.677
LOC101355826
26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.
    
 0.673
LOC101360275
enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
    
 0.646
LOC101352558
cyclin-G-associated kinase.
   
 
 0.630
LOC101349534
26S proteasome non-ATPase regulatory subunit 12.
    
 0.622
LOC101354396
26S proteasome regulatory subunit 10B; Belongs to the AAA ATPase family.
   
 0.611
LOC101353268
26S proteasome regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.611
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.