STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358661Homeobox protein Hox-D10. (340 aa)    
Predicted Functional Partners:
LOC101361257
Homeobox protein Hox-D9.
   
  
0.712
LOC101343281
Collagen alpha-1(II) chain.
   
  
 0.630
LOC101341579
Homeobox protein Hox-B7.
   
 
0.567
LOC101361767
Homeobox protein Hox-D13.
   
  
0.465
LOC101352889
LOW QUALITY PROTEIN: homeobox protein Hox-A10.
   
 
0.448
LOC101358138
Homeobox protein Hox-D3.
   
 
0.433
LOC101347537
Homeobox protein Mohawk.
   
 
 0.421
LOC101344381
Homeobox protein Hox-A11.
   
  
0.410
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.