STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101354505Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (277 aa)    
Predicted Functional Partners:
LOC101356593
Exportin-1 isoform X1.
    
  0.693
LOC101347412
Acidic leucine-rich nuclear phosphoprotein 32 family member A.
   
 0.692
LOC101354555
Acidic leucine-rich nuclear phosphoprotein 32 family member E isoform X1.
   
 0.692
LOC101361673
Acidic leucine-rich nuclear phosphoprotein 32 family member B.
   
 0.662
LOC101342059
Microcephalin isoform X1.
     
 0.631
LOC101342921
Nuclear pore complex protein Nup214.
     
 0.631
LOC101341655
Chromobox protein homolog 3 isoform X1.
   
  
 0.620
LOC101346664
Prostaglandin E synthase 3 isoform X1.
   
    0.613
LOC101341748
Serine/arginine-rich splicing factor 3.
   
  
 0.610
LOC101347922
ELAV-like protein; Belongs to the RRM elav family.
   
  0.585
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.