STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101349698Amyloid-beta A4 precursor protein-binding family A member 1. (835 aa)    
Predicted Functional Partners:
LOC101360581
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
   
 0.994
LOC101346389
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.940
LOC101346965
Regulating synaptic membrane exocytosis protein 2 isoform X21.
   
 
 0.923
LOC101340327
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.845
LOC101347228
Amyloid-beta A4 protein isoform X1.
   
 
 0.841
LOC111819585
Amyloid-beta A4 protein-like.
   
 
 0.841
LOC101345547
Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.829
LOC101359693
55 kDa erythrocyte membrane protein isoform X1; Belongs to the MAGUK family.
   
 0.800
LOC101361620
syntaxin-1A; Belongs to the syntaxin family.
   
 0.683
LOC101354615
syntaxin-1B; Belongs to the syntaxin family.
   
 0.683
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.