STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101355610Cilia- and flagella-associated protein 61. (1237 aa)    
Predicted Functional Partners:
LOC101356242
Testicular haploid expressed gene protein-like.
      
 0.678
LOC101354892
Cilia- and flagella-associated protein 58.
   
  
 0.643
LOC101361732
Cilia- and flagella-associated protein 43.
   
  
 0.557
LOC101356305
N-alpha-acetyltransferase 20.
    
 
 0.547
LOC101355864
Crooked neck-like protein 1.
      
 0.465
LOC101357568
Coiled-coil domain-containing protein 127.
      
 0.465
LOC105756620
Uncharacterized protein LOC105756620.
      
 0.461
LOC101346086
Adipocyte enhancer-binding protein 1.
      
 0.456
LOC101348842
Cilia- and flagella-associated protein 91.
   
 
 0.448
LOC101350930
LIM domain-binding protein 1 isoform X1.
    
 0.437
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.