STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101349954Trafficking protein particle complex subunit 6B. (158 aa)    
Predicted Functional Partners:
LOC101349369
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
LOC101357801
Trafficking protein particle complex subunit 2-like protein isoform X1.
   
 0.999
LOC101345801
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.998
LOC101346945
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.998
LOC101348210
Trafficking protein particle complex subunit 8 isoform X1.
   
 0.998
LOC101347459
Trafficking protein particle complex subunit 2.
   
 0.998
LOC101350919
Trafficking protein particle complex subunit 9.
   
 0.994
LOC101346848
Trafficking protein particle complex subunit 10.
    
 0.994
LOC101355828
Trafficking protein particle complex subunit 11 isoform X1.
   
 0.992
LOC101356030
Trafficking protein particle complex subunit 12 isoform X1.
    
 0.978
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.