STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101345452Calmin. (1012 aa)    
Predicted Functional Partners:
LOC101356968
Intersectin-2 isoform X4.
    
 0.533
LOC101342054
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...]
    
 0.496
LOC101347996
Actin filament-associated protein 1-like 2 isoform X2.
      
 0.454
LOC101345873
Caspase recruitment domain-containing protein 14.
     
 0.449
LOC101351950
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.448
LOC101342681
Calcineurin B homologous protein 3 isoform X1.
   
 
 0.446
LOC101349239
Transcriptional adapter 3.
    
 0.442
LOC101356716
UBX domain-containing protein 7.
    
 
 0.436
LOC101345895
Transcription initiation protein SPT3 homolog isoform X1.
    
 0.430
LOC101350797
Unconventional myosin-IXa isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.424
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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