STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358488Zinc finger FYVE domain-containing protein 21. (234 aa)    
Predicted Functional Partners:
LOC101358931
Apoptosis-stimulating of p53 protein 1.
      
 0.628
LOC101359637
WD repeat-containing protein 3.
      
 0.572
LOC101357293
BAG family molecular chaperone regulator 5.
      
 0.563
LOC101359376
Sperm-associated antigen 17.
      
 0.561
LOC101351588
ATP-dependent RNA helicase TDRD9.
      
 0.551
LOC101343102
Cold shock domain-containing protein E1 isoform X5.
      
 0.550
LOC101341495
Vang-like protein.
      
 0.472
LOC101351328
DNA repair protein XRCC3.
   
  
 0.453
LOC101346485
Tumor necrosis factor alpha-induced protein 2 isoform X1.
      
 0.441
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.