STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101354081Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)    
Predicted Functional Partners:
LOC101342250
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.978
LOC101354854
Transformer-2 protein homolog beta isoform X1.
   
0.853
LOC101358579
Transformer-2 protein homolog alpha isoform X1.
   
0.823
LOC101353609
Serine/arginine-rich splicing factor 11 isoform X1.
   
 0.798
LOC101357666
RNA-binding protein FUS isoform X1.
   
 0.786
LOC101358282
Serine/arginine-rich splicing factor 6.
   
0.774
LOC101353150
Serine/arginine-rich splicing factor 4 isoform X1.
   
0.774
LOC101341748
Serine/arginine-rich splicing factor 3.
   
0.764
LOC101349360
Splicing regulatory glutamine/lysine-rich protein 1 isoform X1.
   
 0.755
LOC101360893
Serine/arginine-rich splicing factor 7 isoform X1.
   
0.749
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.