STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101353055Spermatogenesis-associated protein 21-like. (263 aa)    
Predicted Functional Partners:
LOC101360581
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.655
LOC101353313
Spermatogenesis-associated protein 21-like.
 
      0.574
LOC101341057
WD repeat-containing protein 90.
   
 0.540
LOC101341116
DNA repair protein complementing XP-C cells isoform X1.
    
 0.460
LOC101348151
Serine/threonine-protein kinase DCLK1-like.
   
 0.457
LOC101353945
Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.
   
 0.443
LOC101352240
Peptidylprolyl isomerase.
   
 0.440
LOC101347593
Peptidylprolyl isomerase.
   
 0.440
LOC101342285
Peptidylprolyl isomerase.
   
 0.440
LOC101356235
Troponin I, cardiac muscle isoform X1.
   
 0.429
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (24%) [HD]