STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101352711Unconventional myosin-Vc; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1742 aa)    
Predicted Functional Partners:
LOC101342403
Ras-related protein Rab-11A.
   
 0.783
LOC101348686
Ras-related protein Rab-11B.
   
 0.783
LOC101352618
Rab11 family-interacting protein 2 isoform X1.
   
 0.667
LOC101354026
Exocyst complex component 4 isoform X1.
    
 0.650
LOC101359977
Protein spire homolog 2.
   
 0.623
LOC101361455
Rab11 family-interacting protein 1 isoform X1.
   
 0.620
LOC101345758
Ras-related protein Rab-25.
   
 0.590
LOC101341703
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.571
LOC101358487
Calmodulin; Belongs to the calmodulin family.
    
 0.561
LOC101358846
LOW QUALITY PROTEIN: calmodulin-like protein 3; Belongs to the calmodulin family.
    
 0.561
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.