STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10135663260S ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family. (142 aa)    
Predicted Functional Partners:
LOC101342696
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
LOC101357242
60S ribosomal protein L23a isoform X1; Belongs to the universal ribosomal protein uL23 family.
   
 0.970
LOC101351767
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.969
LOC101351592
60S ribosomal protein L24.
   
 0.966
LOC101358702
60S ribosomal protein L32.
   
 0.965
LOC101351373
60S ribosomal protein L14.
   
 0.965
LOC101359180
60S ribosomal protein L35a.
   
 0.963
LOC101355269
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.963
LOC101343703
60S ribosomal protein L5 isoform X1.
   
 0.962
LOC101348359
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.960
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.