STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101359202Angiopoietin-related protein 6. (469 aa)    
Predicted Functional Partners:
LOC101344547
Transmembrane protein 116 isoform X1.
      
 0.586
LOC101344820
Golgi apparatus protein 1 isoform X1.
      
 0.551
LOC101343858
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF213.
    
 
 0.499
LOC101360153
A disintegrin and metalloproteinase with thrombospondin motifs 15.
      
 0.497
LOC101354783
Transmembrane protein 132B.
     
 0.468
LOC101345848
Nuclear receptor coactivator 5 isoform X1.
      
 0.450
LOC101345507
Oxidoreductase HTATIP2 isoform X1.
      
 0.437
LOC101344277
Tyrosine-protein kinase receptor Tie-1 isoform X1.
    
 0.416
LOC101348476
KAT8 regulatory NSL complex subunit 2 isoform X1.
    
 0.413
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.