STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101353494Intraflagellar transport protein 80 homolog. (777 aa)    
Predicted Functional Partners:
LOC101356614
Clusterin-associated protein 1.
  
 0.994
LOC101347084
Intraflagellar transport protein 57 homolog isoform X1.
   
 0.994
LOC101340974
Intraflagellar transport protein 172 homolog.
   
0.993
LOC101341441
Intraflagellar transport protein 88 homolog isoform X1.
   
 0.993
LOC101360179
TRAF3-interacting protein 1 isoform X1.
    
 0.992
LOC101357346
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.991
LOC101347088
Intraflagellar transport protein 81 homolog.
   
 0.989
LOC101350340
Intraflagellar transport protein 46 homolog isoform X2.
    
 0.988
LOC101347611
Intraflagellar transport protein 56 isoform X1.
   
 0.985
LOC101350099
Intraflagellar transport protein 74 homolog isoform X1.
    
 0.973
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.