STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101352896ephrin-B1; Belongs to the ephrin family. (347 aa)    
Predicted Functional Partners:
LOC101356324
Ephrin type-B receptor 3.
   
 0.986
LOC101346339
Ephrin type-B receptor 4.
   
 0.986
LOC101341761
Ephrin type-B receptor 6.
   
 0.985
LOC101356005
Cytoplasmic protein.
    
 0.981
LOC101353413
Ephrin type-B receptor 1.
   
 0.975
LOC101360928
Ephrin type-B receptor 2 isoform X2.
   
 0.975
LOC101357948
Regulator of G-protein signaling 3 isoform X1.
    
 0.957
LOC101361538
ephrin-B2; Belongs to the ephrin family.
    
0.952
LOC101351586
ephrin-B3; Belongs to the ephrin family.
     
0.938
LOC101357313
Ephrin type-A receptor 1.
   
 0.873
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.