STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358507Urea transporter; Belongs to the urea transporter family. (460 aa)    
Predicted Functional Partners:
LOC101353955
Aquaporin-4 isoform X1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.583
LOC101340445
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
      
 0.574
LOC101348841
Aquaporin-8; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.556
LOC101351576
Angiotensinogen; Belongs to the serpin family.
      
 0.468
LOC101340669
RBR-type E3 ubiquitin transferase.
      
 0.463
LOC101349186
Glycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily.
      
 0.456
LOC101361052
Glycogen synthase kinase-3 alpha; Belongs to the protein kinase superfamily.
      
 0.456
LOC101356064
Extracellular matrix protein 2 isoform X1.
      
 0.435
LOC101347022
Exocyst complex component 1 isoform X1.
      
 0.428
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.