STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10135850960S ribosomal protein L28. (137 aa)    
Predicted Functional Partners:
LOC101358702
60S ribosomal protein L32.
   
 0.999
LOC101351373
60S ribosomal protein L14.
   
 0.999
LOC101344342
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
LOC101343406
40S ribosomal protein S29.
   
 
 0.999
LOC101359180
60S ribosomal protein L35a.
   
 0.999
LOC101343859
60S ribosomal protein L4.
   
 0.999
LOC101345447
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.999
LOC101356805
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
LOC101351767
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
LOC101351592
60S ribosomal protein L24.
   
 0.999
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.