STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10135982360S ribosomal protein L18. (188 aa)    
Predicted Functional Partners:
LOC101358702
60S ribosomal protein L32.
  
 0.999
LOC101351373
60S ribosomal protein L14.
  
 0.999
LOC101344342
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
LOC101358194
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.999
LOC101343406
40S ribosomal protein S29.
  
 
 0.999
LOC101356190
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
LOC101356860
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.999
LOC101359180
60S ribosomal protein L35a.
   
 0.999
LOC101348417
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.999
LOC101343859
60S ribosomal protein L4.
  
 0.999
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.