STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101359038Coiled-coil domain-containing protein 114. (704 aa)    
Predicted Functional Partners:
LOC101341685
Armadillo repeat-containing protein 4.
   
 
 0.836
LOC101348861
Coiled-coil domain-containing protein 151 isoform X1.
   
 0.805
LOC101355410
Tetratricopeptide repeat protein 25.
   
 
 0.796
LOC101360738
Dynein intermediate chain 1, axonemal.
   
 
 0.706
LOC101345965
EF-hand calcium-binding domain-containing protein 1.
    
 
 0.685
LOC101344621
Coiled-coil domain-containing protein 40.
   
  
 0.684
LOC101360228
Tektin-3.
   
 
 0.656
LOC101348268
RIB43A-like with coiled-coils protein 2.
   
 
 0.643
LOC101346650
Meiosis-specific nuclear structural protein 1.
    
 
 0.624
LOC101356854
Cilia- and flagella-associated protein 45.
   
 
 0.623
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.