LOC101361888 protein (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101361888

Serine/threonine-protein kinase 35 isoform X2. (539 aa)

Predicted Functional Partners:

LOC101345725

0.818

LOC101345298

0.818

LOC101346435

0.802

LOC101351891

0.789

LOC101346865

0.762

LOC101349952

0.751

LOC101359690

0.751

LOC101357622

0.724

LOC101359341

0.714

LOC101351212

0.704

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101345298	LOC101345725	A0A2Y9R6Q6	A0A2Y9DVX8	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	0.999
LOC101345298	LOC101346435	A0A2Y9R6Q6	A0A2Y9S0L4	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.898
LOC101345298	LOC101346865	A0A2Y9R6Q6	A0A2Y9S1E4	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Autophagy-related protein 101.	0.991
LOC101345298	LOC101349952	A0A2Y9R6Q6	A0A2Y9FWJ9	Phosphatidylinositol 3-kinase catalytic subunit type 3.	LOW QUALITY PROTEIN: beclin-2.	0.995
LOC101345298	LOC101351212	A0A2Y9R6Q6	A0A2Y9QVP6	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.902
LOC101345298	LOC101351891	A0A2Y9R6Q6	A0A2Y9E5M4	Phosphatidylinositol 3-kinase catalytic subunit type 3.	RB1-inducible coiled-coil protein 1 isoform X1.	0.988
LOC101345298	LOC101357622	A0A2Y9R6Q6	A0A2Y9QME9	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Autophagy-related protein 3.	0.949
LOC101345298	LOC101359341	A0A2Y9R6Q6	A0A2Y9DAB9	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Beclin 1-associated autophagy-related key regulator.	0.999
LOC101345298	LOC101359690	A0A2Y9R6Q6	A0A2Y9QP92	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Beclin-1 isoform X1.	0.995
LOC101345298	LOC101361888	A0A2Y9R6Q6	A0A2Y9DX79	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Serine/threonine-protein kinase 35 isoform X2.	0.818
LOC101345725	LOC101345298	A0A2Y9DVX8	A0A2Y9R6Q6	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.999
LOC101345725	LOC101346435	A0A2Y9DVX8	A0A2Y9S0L4	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.	0.891
LOC101345725	LOC101346865	A0A2Y9DVX8	A0A2Y9S1E4	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Autophagy-related protein 101.	0.990
LOC101345725	LOC101349952	A0A2Y9DVX8	A0A2Y9FWJ9	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	LOW QUALITY PROTEIN: beclin-2.	0.995
LOC101345725	LOC101351212	A0A2Y9DVX8	A0A2Y9QVP6	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.899
LOC101345725	LOC101351891	A0A2Y9DVX8	A0A2Y9E5M4	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	RB1-inducible coiled-coil protein 1 isoform X1.	0.988
LOC101345725	LOC101357622	A0A2Y9DVX8	A0A2Y9QME9	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Autophagy-related protein 3.	0.947
LOC101345725	LOC101359341	A0A2Y9DVX8	A0A2Y9DAB9	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Beclin 1-associated autophagy-related key regulator.	0.999
LOC101345725	LOC101359690	A0A2Y9DVX8	A0A2Y9QP92	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Beclin-1 isoform X1.	0.995
LOC101345725	LOC101361888	A0A2Y9DVX8	A0A2Y9DX79	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	Serine/threonine-protein kinase 35 isoform X2.	0.818