STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361884Phosphatidylethanolamine-binding protein 4. (222 aa)    
Predicted Functional Partners:
LOC101344690
39S ribosomal protein L40, mitochondrial isoform X1.
   
 
 0.797
LOC101348135
28S ribosomal protein S29, mitochondrial isoform X1.
   
 
 0.790
LOC101354234
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 0.781
LOC101346136
39S ribosomal protein L10, mitochondrial.
   
 
 0.778
LOC101357725
28S ribosomal protein S10, mitochondrial.
   
 
 0.774
LOC101341283
39S ribosomal protein L19, mitochondrial.
   
 
 0.768
LOC101358398
39S ribosomal protein L44, mitochondrial.
   
 
 0.763
LOC101347057
39S ribosomal protein L46, mitochondrial isoform X1.
   
 
 0.757
LOC101358672
39S ribosomal protein L4, mitochondrial.
   
 
 0.757
LOC101343319
39S ribosomal protein L13, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.740
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.