STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101353767Small muscular protein. (84 aa)    
Predicted Functional Partners:
LOC101343557
Cysteine and glycine-rich protein 3.
   
  
 0.692
LOC101350996
Alpha-actinin-3.
   
  
 0.655
LOC101340564
Integrin beta-1-binding protein 2.
   
  
 0.635
LOC101356849
LOW QUALITY PROTEIN: myosin-7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.613
LOC101343760
antithrombin-III isoform X1; Belongs to the serpin family.
      
 0.580
LOC101357823
Protein-serine/threonine kinase.
      
 0.551
LOC101345831
Myozenin-2.
   
  
 0.535
LOC101351375
G-protein-signaling modulator 2 isoform X1.
      
 0.471
LOC101348975
Myosin regulatory light chain 2, skeletal muscle isoform.
   
  
 0.467
LOC101340643
Stereocilin.
      
 0.441
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.