LOC101361287 protein (Trichechus manatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101361287

Major facilitator superfamily domain-containing protein 10. (454 aa)

Predicted Functional Partners:

LOC101357719

0.690

LOC101352053

0.678

LOC101352003

0.676

LOC101358573

0.668

LOC101357257

0.663

LOC101340275

0.634

LOC101357229

0.623

LOC101356669

0.618

LOC101342434

0.603

LOC101342749

0.583

Your Current Organism:

Trichechus manatus

NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101340275	LOC101342434	A0A2Y9DCT8	A0A2Y9DXP1	Thymic stromal cotransporter homolog isoform X1.	Equilibrative nucleoside transporter 3.	0.552
LOC101340275	LOC101357257	A0A2Y9DCT8	A0A2Y9D7P5	Thymic stromal cotransporter homolog isoform X1.	Major facilitator superfamily domain-containing protein 9 isoform X1.	0.577
LOC101340275	LOC101361287	A0A2Y9DCT8	A0A2Y9DYR1	Thymic stromal cotransporter homolog isoform X1.	Major facilitator superfamily domain-containing protein 10.	0.634
LOC101342434	LOC101340275	A0A2Y9DXP1	A0A2Y9DCT8	Equilibrative nucleoside transporter 3.	Thymic stromal cotransporter homolog isoform X1.	0.552
LOC101342434	LOC101357257	A0A2Y9DXP1	A0A2Y9D7P5	Equilibrative nucleoside transporter 3.	Major facilitator superfamily domain-containing protein 9 isoform X1.	0.586
LOC101342434	LOC101361287	A0A2Y9DXP1	A0A2Y9DYR1	Equilibrative nucleoside transporter 3.	Major facilitator superfamily domain-containing protein 10.	0.603
LOC101342749	LOC101357257	A0A2Y9DKE6	A0A2Y9D7P5	Protein spinster homolog 3.	Major facilitator superfamily domain-containing protein 9 isoform X1.	0.401
LOC101342749	LOC101361287	A0A2Y9DKE6	A0A2Y9DYR1	Protein spinster homolog 3.	Major facilitator superfamily domain-containing protein 10.	0.583
LOC101352003	LOC101352053	A0A2Y9QUE2	A0A2Y9E3R0	UNC93-like protein MFSD11.	Major facilitator superfamily domain-containing protein 6.	0.667
LOC101352003	LOC101356669	A0A2Y9QUE2	A0A2Y9E5N4	UNC93-like protein MFSD11.	Protein spinster homolog 1.	0.541
LOC101352003	LOC101357229	A0A2Y9QUE2	A0A2Y9FYW4	UNC93-like protein MFSD11.	Putative transporter SVOPL.	0.550
LOC101352003	LOC101357257	A0A2Y9QUE2	A0A2Y9D7P5	UNC93-like protein MFSD11.	Major facilitator superfamily domain-containing protein 9 isoform X1.	0.550
LOC101352003	LOC101357719	A0A2Y9QUE2	A0A2Y9R0C0	UNC93-like protein MFSD11.	Major facilitator superfamily domain-containing protein 12.	0.637
LOC101352003	LOC101361287	A0A2Y9QUE2	A0A2Y9DYR1	UNC93-like protein MFSD11.	Major facilitator superfamily domain-containing protein 10.	0.676
LOC101352053	LOC101352003	A0A2Y9E3R0	A0A2Y9QUE2	Major facilitator superfamily domain-containing protein 6.	UNC93-like protein MFSD11.	0.667
LOC101352053	LOC101357229	A0A2Y9E3R0	A0A2Y9FYW4	Major facilitator superfamily domain-containing protein 6.	Putative transporter SVOPL.	0.429
LOC101352053	LOC101357257	A0A2Y9E3R0	A0A2Y9D7P5	Major facilitator superfamily domain-containing protein 6.	Major facilitator superfamily domain-containing protein 9 isoform X1.	0.574
LOC101352053	LOC101357719	A0A2Y9E3R0	A0A2Y9R0C0	Major facilitator superfamily domain-containing protein 6.	Major facilitator superfamily domain-containing protein 12.	0.673
LOC101352053	LOC101361287	A0A2Y9E3R0	A0A2Y9DYR1	Major facilitator superfamily domain-containing protein 6.	Major facilitator superfamily domain-containing protein 10.	0.678
LOC101356669	LOC101352003	A0A2Y9E5N4	A0A2Y9QUE2	Protein spinster homolog 1.	UNC93-like protein MFSD11.	0.541