STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101351521Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (284 aa)    
Predicted Functional Partners:
LOC101350184
Zinc finger protein 462.
    
 0.634
LOC101349937
UV excision repair protein RAD23 homolog B.
   
 
 0.606
LOC101355529
Protein PBDC1.
      
 0.585
LOC101348998
Tricarboxylate transport protein, mitochondrial isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.564
LOC101353888
Palmitoyl-protein thioesterase 1.
      
 0.550
LOC111818986
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.504
LOC101355164
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.504
LOC101352285
piRNA biogenesis protein EXD1.
      
 0.495
LOC101345278
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.484
LOC101348881
Golgin subfamily A member 7 isoform X1.
   
 0.478
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.