STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101340582Ankyrin repeat domain-containing protein 65. (269 aa)    
Predicted Functional Partners:
LOC101351708
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1.
    
 
 0.679
LOC101348402
Zinc finger and BTB domain-containing protein 7C.
    
 0.667
LOC101358704
Rac GTPase-activating protein 1.
    
 
 0.592
LOC101348907
B-cell lymphoma 3 protein.
  
     0.508
LOC101349648
E3 ubiquitin-protein ligase LNX isoform X1.
    
 0.473
LOC101350302
Ankyrin repeat and MYND domain-containing protein 2.
  
     0.467
LOC101354887
Ankyrin repeat domain-containing protein 53.
  
 
  0.462
LOC101347088
Intraflagellar transport protein 81 homolog.
    
 0.445
LOC101341441
Intraflagellar transport protein 88 homolog isoform X1.
   
 0.424
LOC101342680
KN motif and ankyrin repeat domain-containing protein 3.
  
     0.421
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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