STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101346079Retinol-binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)    
Predicted Functional Partners:
LOC101341410
Lecithin retinol acyltransferase.
     
 0.617
LOC101348552
Apolipoprotein B-100.
   
 
 0.558
LOC101357938
Retinol dehydrogenase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.532
LOC101358377
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.532
LOC101346340
Fatty acid-binding protein, intestinal; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
  
  
 0.510
LOC101347630
Retinol dehydrogenase 12.
   
 
 0.496
LOC101355027
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.496
LOC105755962
Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.496
LOC101358257
Dehydrogenase/reductase SDR family member on chromosome X isoform X1.
   
 
 0.496
LOC111819995
Uncharacterized protein LOC111819995.
   
 
 0.468
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.