STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358877Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (452 aa)    
Predicted Functional Partners:
LOC101354272
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 0.993
LOC101355032
28S ribosomal protein S16, mitochondrial.
  
 0.963
LOC101357724
39S ribosomal protein L2, mitochondrial.
 
 0.956
LOC101348775
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 0.953
LOC101356805
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.950
LOC101353490
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.950
LOC101360596
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.950
LOC101348326
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
  
 0.950
LOC101350865
40S ribosomal protein S18 isoform X1; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.950
LOC101360259
39S ribosomal protein L21, mitochondrial isoform X1.
  
 0.949
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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