STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101343634Receptor-type tyrosine-protein phosphatase mu isoform X1. (1403 aa)    
Predicted Functional Partners:
LOC101351897
Catenin beta-1.
    
 0.918
LOC101341448
Catenin delta-1 isoform X1.
   
 0.907
LOC101358590
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.551
LOC101345414
Inactive tyrosine-protein kinase transmembrane receptor ROR1 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.499
LOC101349745
Tyrosine-protein kinase transmembrane receptor ROR2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.499
LOC101355708
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.471
LOC101356599
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.471
LOC101359012
Growth factor receptor-bound protein 2.
   
 0.466
LOC101353222
BMP/retinoic acid-inducible neural-specific protein 1.
  
  
 0.460
LOC101357824
Extracellular matrix protein FRAS1.
   
 
 0.444
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.