STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101349915Kelch-like protein 31. (634 aa)    
Predicted Functional Partners:
LOC101345394
Transmembrane protein 161A.
      
 0.684
LOC101359624
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.653
LOC101358617
Rhomboid-related protein 4.
      
 0.639
LOC101358301
Transmembrane protein 70, mitochondrial.
      
 0.599
LOC101350835
Trimeric intracellular cation channel type A.
   
  
 0.587
LOC101350377
Popeye domain-containing protein 2 isoform X1.
   
  
 0.586
LOC101356633
Transmembrane protein 214.
      
 0.580
LOC101348203
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4.
   
  
 0.559
LOC101360319
N-terminal Xaa-Pro-Lys N-methyltransferase 1 isoform X1.
   
  
 0.555
LOC101344547
Transmembrane protein 116 isoform X1.
      
 0.547
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.