STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101359675Interleukin-1. (155 aa)    
Predicted Functional Partners:
LOC101343821
LOW QUALITY PROTEIN: interleukin-1 receptor-like 2.
   
 0.966
LOC101349040
Interleukin-1 receptor accessory protein isoform X1.
   
 
 0.954
LOC101340409
Interleukin-1.
  
 
0.711
LOC101358013
Interleukin-1 receptor type 1.
   
 0.676
LOC101344129
NF-kappa-B inhibitor zeta isoform X1.
      
 0.638
LOC101361982
LOW QUALITY PROTEIN: interleukin-36 gamma.
  
 
0.634
LOC101346474
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.589
LOC101346429
Interferon gamma.
      
 0.574
LOC101351590
Interleukin-6.
   
  
 0.571
LOC101348624
Interleukin-18.
     
 0.558
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.