STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101351641Glycodelin; Belongs to the calycin superfamily. Lipocalin family. (160 aa)    
Predicted Functional Partners:
LOC101349978
Kappa-casein.
   
 0.799
LOC101348221
Alpha-lactalbumin; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.793
LOC101350994
Beta-casein.
   
  
 0.632
LOC101361452
Parafibromin isoform X1.
   
 0.614
LOC101358614
Sperm acrosome membrane-associated protein 3; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.602
LOC101355229
Lysozyme-like protein 4; Belongs to the glycosyl hydrolase 22 family.
   
  
 0.597
LOC101351654
Growth/differentiation factor 5.
      
 0.568
LOC101360452
RNA polymerase II-associated factor 1 homolog.
   
 0.552
LOC101344166
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
  
 0.551
LOC101357275
Protein AMBP.
   
 
 0.550
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.