STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101348990Olfactory receptor 5D18-like; Belongs to the G-protein coupled receptor 1 family. (308 aa)    
Predicted Functional Partners:
LOC101351136
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
    
 0.743
LOC101346169
Guanine nucleotide-binding protein G(Olf) subunit alpha.
    
 0.734
LOC101341907
Beta-arrestin-2 isoform X1.
   
 0.711
LOC101354945
Beta-arrestin-1.
   
 0.711
LOC101350742
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
  0.706
LOC101347845
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 isoform X1.
    
  0.692
LOC101357163
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.688
LOC101346329
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.688
LOC101342638
cAMP-dependent protein kinase catalytic subunit beta isoform X1; Belongs to the protein kinase superfamily.
    
  0.662
LOC101348995
cAMP-dependent protein kinase catalytic subunit alpha.
    
  0.662
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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