STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101341554Proteasome subunit beta. (219 aa)    
Predicted Functional Partners:
LOC101342060
Proteasome subunit beta.
  
0.999
LOC101340422
Proteasome subunit alpha type.
   
 0.998
LOC101356505
Proteasome subunit alpha type.
   
 0.998
LOC101352422
Proteasome subunit alpha type.
   
 0.998
LOC101343402
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.997
LOC101346461
Proteasome subunit beta.
   
 0.995
LOC101348858
Proteasome subunit beta.
   
0.995
LOC101355548
Proteasome subunit alpha type.
   
 0.995
LOC101347799
Proteasome subunit alpha type.
   
 0.995
LOC101359762
Proteasome subunit beta.
   
 0.994
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.