Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101342830 | LOC101347482 | A0A2Y9DFP3 | A0A2Y9DAN8 | Nuclear transcription factor Y subunit beta. | TATA box-binding protein-like protein 2. | 0.406 |
LOC101342830 | LOC101359502 | A0A2Y9DFP3 | A0A2Y9D6R2 | Nuclear transcription factor Y subunit beta. | TATA-box-binding protein. | 0.406 |
LOC101342830 | LOC105756393 | A0A2Y9DFP3 | A0A2Y9FXD2 | Nuclear transcription factor Y subunit beta. | GATA-type zinc finger protein 1. | 0.520 |
LOC101344282 | LOC101345377 | A0A2Y9DEN2 | A0A2Y9R680 | CREB-binding protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.610 |
LOC101344282 | LOC101347482 | A0A2Y9DEN2 | A0A2Y9DAN8 | CREB-binding protein. | TATA box-binding protein-like protein 2. | 0.573 |
LOC101344282 | LOC101351759 | A0A2Y9DEN2 | A0A2Y9DLS5 | CREB-binding protein. | Hepatocyte nuclear factor 3-alpha. | 0.519 |
LOC101344282 | LOC101354174 | A0A2Y9DEN2 | A0A2Y9DKZ8 | CREB-binding protein. | Hepatocyte nuclear factor 3-beta. | 0.519 |
LOC101344282 | LOC101357079 | A0A2Y9DEN2 | A0A2Y9RU08 | CREB-binding protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.610 |
LOC101344282 | LOC101358329 | A0A2Y9DEN2 | A0A2Y9DUQ7 | CREB-binding protein. | Hepatocyte nuclear factor 3-gamma. | 0.425 |
LOC101344282 | LOC101359502 | A0A2Y9DEN2 | A0A2Y9D6R2 | CREB-binding protein. | TATA-box-binding protein. | 0.573 |
LOC101344282 | LOC105756393 | A0A2Y9DEN2 | A0A2Y9FXD2 | CREB-binding protein. | GATA-type zinc finger protein 1. | 0.465 |
LOC101345377 | LOC101344282 | A0A2Y9R680 | A0A2Y9DEN2 | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | CREB-binding protein. | 0.610 |
LOC101345377 | LOC105756393 | A0A2Y9R680 | A0A2Y9FXD2 | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | GATA-type zinc finger protein 1. | 0.475 |
LOC101347482 | LOC101342830 | A0A2Y9DAN8 | A0A2Y9DFP3 | TATA box-binding protein-like protein 2. | Nuclear transcription factor Y subunit beta. | 0.406 |
LOC101347482 | LOC101344282 | A0A2Y9DAN8 | A0A2Y9DEN2 | TATA box-binding protein-like protein 2. | CREB-binding protein. | 0.573 |
LOC101347482 | LOC101351759 | A0A2Y9DAN8 | A0A2Y9DLS5 | TATA box-binding protein-like protein 2. | Hepatocyte nuclear factor 3-alpha. | 0.451 |
LOC101347482 | LOC101354174 | A0A2Y9DAN8 | A0A2Y9DKZ8 | TATA box-binding protein-like protein 2. | Hepatocyte nuclear factor 3-beta. | 0.436 |
LOC101347482 | LOC101359502 | A0A2Y9DAN8 | A0A2Y9D6R2 | TATA box-binding protein-like protein 2. | TATA-box-binding protein. | 0.902 |
LOC101347482 | LOC105756393 | A0A2Y9DAN8 | A0A2Y9FXD2 | TATA box-binding protein-like protein 2. | GATA-type zinc finger protein 1. | 0.513 |
LOC101351759 | LOC101344282 | A0A2Y9DLS5 | A0A2Y9DEN2 | Hepatocyte nuclear factor 3-alpha. | CREB-binding protein. | 0.519 |
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