STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361691Rap guanine nucleotide exchange factor-like 1 isoform X1. (662 aa)    
Predicted Functional Partners:
LOC101356550
Rap guanine nucleotide exchange factor 5 isoform X1.
    
 
0.633
LOC101358218
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3.
      
 0.576
LOC101346440
Protein SERAC1 isoform X1.
      
 0.574
LOC101351826
Protein lin-52 homolog isoform X1.
      
 0.574
LOC101349251
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1.
   
  
 0.560
LOC101346965
Regulating synaptic membrane exocytosis protein 2 isoform X21.
    
 
 0.526
LOC101343061
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
    
 0.493
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.