STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101341955Fibronectin type III domain-containing protein 1. (2084 aa)    
Predicted Functional Partners:
LOC101352321
LOW QUALITY PROTEIN: DCC-interacting protein 13-alpha.
    
  0.911
LOC101360569
DCC-interacting protein 13-beta.
    
  0.911
LOC101353699
netrin-G1 isoform X1.
    
 0.580
LOC101352256
Netrin-3.
    
 0.559
LOC101345448
netrin-G2.
    
 0.559
LOC101352529
Netrin-1.
    
 0.559
LOC101357227
Netrin-5.
    
 0.559
LOC101353588
Usher syndrome type-1C protein-binding protein 1.
    
 0.559
LOC101354947
Protein-tyrosine kinase 2-beta isoform X3; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.513
LOC101351714
Focal adhesion kinase 1 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.513
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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