STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101355111LOW QUALITY PROTEIN: doublesex- and mab-3-related transcription factor C1. (256 aa)    
Predicted Functional Partners:
LOC101342347
KICSTOR complex protein kaptin.
    
 0.594
LOC101348267
GATOR complex protein DEPDC5.
   
 0.574
LOC101345240
GATOR complex protein WDR59 isoform X1.
    
 0.558
LOC101349872
GATOR complex protein WDR24.
    
 0.557
LOC101344254
GATOR complex protein NPRL2 isoform X1.
    
 0.553
LOC101354046
Mitochondrial inner membrane protease subunit.
    
 0.448
LOC101351380
DNA repair protein XRCC4 isoform X1.
    
 0.448
LOC101354770
KICSTOR complex protein ITFG2.
    
 0.448
LOC101344612
GATOR complex protein NPRL3 isoform X2.
     
 0.426
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.