STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350792Tripartite motif-containing protein 67. (793 aa)    
Predicted Functional Partners:
LOC101345143
Synaptosomal-associated protein 47 isoform X1.
   
 
 0.588
LOC101355745
Transmembrane protein 247.
      
 0.449
LOC101360695
Leucine repeat adapter protein 25.
      
 0.443
LOC101342480
Rho guanine nucleotide exchange factor 10.
      
 0.437
LOC101359817
Netrin receptor DCC.
   
 
 0.406
LOC101356510
Immunoglobulin superfamily DCC subclass member 3.
   
 
 0.406
LOC101351224
Immunoglobulin superfamily DCC subclass member 3.
   
 
 0.406
LOC101351485
Immunoglobulin superfamily DCC subclass member 4.
   
 
 0.406
LOC101354250
Neogenin.
   
 
 0.406
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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